Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814424.1_cds_XP_016497924.1_12008
CDS Infomation

[gene=LOC107816696] [db_xref=GeneID:107816696] [protein=uncharacterized protein LOC107816696 isoform X2] [protein_id=XP_016497924.1] [location=complement(join(51561..51611,51868..51918,52013..52087,52388..52450,53250..53339,53532..53729,53836..53962,54161..54622,54766..54965,55469..55513,56232..56291,56809..56892,56984..57172,57714..58007))] [gbkey=CDS]
Sequence

ATGGAGAAAATTGAAGAGTCAGGTAGCCCGGGTTGGGGTGCATCGTTTTTTCAAACAACC
GAAGATGTTGCAAGAGCTGTTACTGCTGCTGCAGCTGCTGTTCGGTCACCACGACCTTCC
GTTGTATATTCATCTAAAGATGATAGTGGTAGCCAGCTTCAGAAACTTCAGCGTCAAGTT
TCTAGATTAATGAAAGGTTTTTCCAGTCCCCCTCAAGTTAAAAGTGGAGCCTACAACCCG
GAAATACTAACTAGCCAAAAGCGTCAGTGGGCTAGGTTTCAGTTGCAATCCCTGGATCAT
AGAGTTTGGAAAGAGCCATCAAGGCTTTTTGAGAGCATGGTAGTTGTCGGACTCCATCCT
AACTGTGATATTCAAGCGCTTCAAAGGCTTTATTTTTCAAGAAAGCTAGACGGTCCCGGG
AGATTTAGAAGTGCACTCGGTGGTCAAAGTCAATCACGGGTGGAACCTAACCTTGAGCCT
CAGGTCTTGTTTGTTTACCCTCCAGAGAAGCAACTCCCACTGAAATACAAGGATCTTCTC
TCATTCTGCTTTCCAGCTGGAGTAGAGGTTCATGCTGTTGAGAGAACTCCATCAATGAGT
GAGTTAAATGAAATACTTCTGGGTCAGGAACACCTTAAACAAAGTGATCTATCCTTTGTG
TTCCGGCTTCAGGTTGCTGATAGTTCAACCCTATACGGTTGCTGTGTTCTAGTTGAGGAA
ATGGTCCATAAACCCTCTGGATTGCTTTCCATGATTTCAGATGGACAACATACCCGCTTG
GGTATTAGCCGCCAAATTTTAACGACACGCCGCTGTTATTGCATTCTTTCGAGACTTCCA
TTTTTCGATCTTCACTTTGGTGTATTAAATAGCATTTTCACTGAAGAAAGATTGGAGCGG
TTAACAAAACAAGTTGGTGATCTTAATTTTGATTCCCTTATGATTGATGACAAGGAAGAA
AATCTGGAAGAAAATCCTTCCAGCAGATCATTGGAAGAAAGAGATCAGTACATCCTGAAT
GGCTCTGTAGAAAGCTCCCAACCAATCACGACTGATTCTGTGATTAGTGGAACCGTTGAT
GACATGTCTCAGCTGGAGTATAGAGTTGTAGAAGGGTACGTACACCCAAAGAAAGATGGA
AGTGATAACAAGGCACGTATGGTTGATACTGACATAGATTGTGCTAATAAAGAAGTTATA
CTTGAAAGGCAAGTCCCTGAAGTTTCTGATAATTCCACTGATGATAACAAACAACTGGTA
GAAAAGGGTGTACCGCATGCTGTTTTGCCACTTTTAAGATATCATCAGTGTGAAAGTTCT
GAATCTTCCTCTAGCTTCCAGGGCTCTCCTAGTGAAGATAGACATTTTAGAAGTGATTTT
GATGAGACCGAAACAGAGGAAGCATCCTTTTCTGGTCAAGATGATTCAAGTCAGCATAGT
GATATAGTAGAATGGGCAAAGGCCAACAATAATGGATCTTTGCAAATAATATGTGAATAT
TACCAGCTAAAATGTCCTGCAAGGGGCTCAACAATTAAGTTCCATCCTCTGGATCACCTT
CATCCTTTAGAATACCATAGACCTGACGAAGCGCTTTTGCACGTTGCTGGATCGACAATT
GACTTAAAATCATGCAATACAAGTTTGGAGTTAGCTGAGGCTCACAATGCACTCATGGTG
GAAGAGGAAGCAACTGCTCTGTCAGTCTGGGCTATTGCATGCTTATGCGGCTCATTGCGG
CTTGAACATGTGCTGACACTGTTTGCGGCAGCTTTACTGGAGAAGCAAATTGTTGTGGTT
TGTTCAAATTTGGGAATATTGTCTGCTTGTGTTCTGTCCATTATCCCTTTGATTCGTCCT
TATCAGTGGCAAAGCTTGATAATGCCGGTTTTGCCAAATGACATGCTGGATTTTCTTGAT
GCACCCGTTCCCTATATAATATCTTGCATTATTGGGAAATCATTCAGTATGTTTTCTTCC
TGTATTTAG

Peptide Sequence

PEP ID

XP_016497924.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107816696 isoform X2 [Nicotiana tabacum]
Sequence

MEKIEESGSPGWGASFFQTTEDVARAVTAAAAAVRSPRPSVVYSSKDDSGSQLQKLQRQV
SRLMKGFSSPPQVKSGAYNPEILTSQKRQWARFQLQSLDHRVWKEPSRLFESMVVVGLHP
NCDIQALQRLYFSRKLDGPGRFRSALGGQSQSRVEPNLEPQVLFVYPPEKQLPLKYKDLL
SFCFPAGVEVHAVERTPSMSELNEILLGQEHLKQSDLSFVFRLQVADSSTLYGCCVLVEE
MVHKPSGLLSMISDGQHTRLGISRQILTTRRCYCILSRLPFFDLHFGVLNSIFTEERLER
LTKQVGDLNFDSLMIDDKEENLEENPSSRSLEERDQYILNGSVESSQPITTDSVISGTVD
DMSQLEYRVVEGYVHPKKDGSDNKARMVDTDIDCANKEVILERQVPEVSDNSTDDNKQLV
EKGVPHAVLPLLRYHQCESSESSSSFQGSPSEDRHFRSDFDETETEEASFSGQDDSSQHS
DIVEWAKANNNGSLQIICEYYQLKCPARGSTIKFHPLDHLHPLEYHRPDEALLHVAGSTI
DLKSCNTSLELAEAHNALMVEEEATALSVWAIACLCGSLRLEHVLTLFAAALLEKQIVVV
CSNLGILSACVLSIIPLIRPYQWQSLIMPVLPNDMLDFLDAPVPYIISCIIGKSFSMFSS
CI

Transcript Sequence

Gene sequence data has not been registered.